Package: CovCombR 1.0

CovCombR: Combine Partial Covariance / Relationship Matrices

Combine partial covariance matrices using a Wishart-EM algorithm. Methods are described in the November 2019 article by Akdemir et al. <https://www.biorxiv.org/content/10.1101/857425v1>. It can be used to combine partially overlapping covariance matrices from independent trials, partially overlapping multi-view relationship data from genomic experiments, partially overlapping Gaussian graphs described by their covariance structures. High dimensional covariance estimation, multi-view data integration. high dimensional covariance graph estimation.

Authors:Deniz Akdemir, Mohamed Somo, Julio Isidro Sanchez

CovCombR_1.0.tar.gz
CovCombR_1.0.zip(r-4.5)CovCombR_1.0.zip(r-4.4)CovCombR_1.0.zip(r-4.3)
CovCombR_1.0.tgz(r-4.4-any)CovCombR_1.0.tgz(r-4.3-any)
CovCombR_1.0.tar.gz(r-4.5-noble)CovCombR_1.0.tar.gz(r-4.4-noble)
CovCombR_1.0.tgz(r-4.4-emscripten)CovCombR_1.0.tgz(r-4.3-emscripten)
CovCombR.pdf |CovCombR.html
CovCombR/json (API)

# Install 'CovCombR' in R:
install.packages('CovCombR', repos = c('https://denizakdemir.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.70 score 5 scripts 147 downloads 1 mentions 2 exports 4 dependencies

Last updated 5 years agofrom:c0d3a04e1c. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 27 2024
R-4.5-winOKOct 27 2024
R-4.5-linuxOKOct 27 2024
R-4.4-winOKOct 27 2024
R-4.4-macOKOct 27 2024
R-4.3-winOKOct 27 2024
R-4.3-macOKOct 27 2024

Exports:CovCombGetVarCov

Dependencies:CholWishartlatticeMatrixnlme

Combining partial covariance matrices using CovCombR package

Rendered fromCovCombR.rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2020-01-18
Started: 2020-01-18